Events

 

09.02.24        
February         
Maersk Tower top floor, 7.15.92       

9:00-9:45: Zehra Caldwell Abay-Nørgaard, Kirkeby lab, reNEW, UCPH, Unravelling the development of the arcuate nucleus using stem cells

9:45-10:30: Laura Wolbeck, Khodosevich lab, BRIC, UCPH, Differential impact of maternal inflammation on neuronal progenitors in the developing neocortex                                                                         

15.03.24        
March              
Maersk Tower top floor, 7.15.92       

9:00-9:45: Ali Altintas, Barres lab, CBMR, KU, Effect of let-7 microinjection in mouse blastomeres: an RNA-seq analysis of ‘single’ cells

9:45-10:30: Jacob Hecksher, Gubra, TBA                                                                             

12.04.24        
April                 
Maersk Tower top floor, 7.15.92       

13:00-13:45: Xiangning Ding, Paludan lab, AU, Deciphering single-cell transcriptome reveals key regulator in immune response against HSV-1 infection in mouse brainstem

13:45-14:30: Asta Mannstaedt Rasmussen, Pedersed lab, AU, Probabilistic modeling of microRNA activity at the single cell level                                                        

17.05.24        
May                  
Maersk Tower top floor, 7.15.92       

9:00-9:45: Mustafa Ghanizada, Kløverpris lab, ISIM, KU, Single-cell RNA sequencing of liver and draining lymph nodes from HIV infected individuals

9:45-10:30: Jamie Yam Auxillos, Sandelin lab, BRIC, KU, A microfluidics platform for spatially resolved analysis of the impact of microenvironmental gradients on cancer cell phenotypes                                                                            

14.06.24        
June                 
Maersk Tower top floor, 7.15.92       

9:00-9:45: TBA                          

9:45-10:30: TBA                          

 

 

 

Single Cell Seminars have been held since 2016, here only Seminars since Oct 2020 are shown

12.01.24              

9:00-9:45: Wenning Zheng, ISIM, UCPH, CITE-seq and T cell receptor sequencing reveal potential local precursor of skin-resident CD8 T cells in health and disease

Maersk Tower top floor, 7.15.92                                                                             

15.12.23                   

9:00-9:45: Carmelo Bellardita, Department of Neuroscience, UCPH, Microphagens reside in the muscle spindle to control sensorimotor function at millisecond timescale

9:45-10:30: Xian Xin, Khodosevich lab, BRIC, UCPH, Unraveling Epileptogenesis Mechanisms via scRNA-seq from Scn2ap.A263V Mouse Model

Maersk Tower top floor, 7.15.92                                                                               

17.11.23             

9:00-9:45: Gaurav Rathore, Kirkeby lab, reNEW, UCPH, Studying Early Human Neural regionalisation in a Microfluidic Model with Single-Cell Transcriptomics

9:45-10:30: Migle Mikutenaite, Weischenfeldt lab, BRIC, UCPH, Tumour-microenvironment interactions in prostate cancer disease trajectories

Maersk Tower top floor, 7.15.92                                                          

13.10.23         

9:00-9:45: Dorottya Ralbovszki, Vanessa Hall lab, Department of Veterinary and Animal Sciences, UCPH, Single cell mapping the evolution of the spatial processing centre in the brain

9:45-10:30: Albin Sandelin, BRIC, UCPH, A microfluidics workflow for spatial analysis of microenvironmental gradient impact on cancer cell phenotypes

Maersk Tower top floor, 7.15.92       

24.02.23

PhD student Frederik Nørby Friis Sørensen:  Network analysis of epileptic TSC2 pediatric patients

Postdoc Mette Q. Ludwig: Transcriptional states underlying cagrilintide signaling in the dorsal vagal complex

Faculty Club at Panum (Mødelokale 16.6.16) and on Zoom 

27.01.23     

Postdoc Bernd Coester: Intersecting Neuroscience and snRNA sequencing to add projection identities to neuronal data sets     

Assistant Professor Navneet: A Vasistha:Single-cell analysis of myelin-neuron interactions in 22q11.2 model of psychiatric illness   

Faculty Club at Panum (Mødelokale 16.6.16) and on Zoom 

16.12.22

PhD student Katarina Dragicevic: Hiding in plain sight: uncovering diseased interneuron subtypes in a 15q.13.3+/- schizophrenia mouse model

PhD student Petar Todorov: How to use your single-cell data to select spatial probes

Faculty Club at Panum (Mødelokale 16.6.16) and on Zoom 

25.11.22

09:00 – 09:30

Clonal evolution of glioblastoma during therapy at single cell resolution

postdoc Josephine Deleuran Hendriksen, Weichenfeldt Lab, Biotech Research and Innovation Centre, University of Copenhagen

09:30 – 09:45

Coffee, croissants and discussion

09:45 – 10:30

Using multimodal single cell sequencing of the human liver to dissect the genetic basis of diabetes and obesity

Postdoc Malte Thodberg, Hansen Lab, Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen

Location: Meeting room 16.6.16 in the Faculty Club and zoom

28.10.22

09:00 – 09:30

STAT signalling promotes the emergence of regenerative cell states in ulcerative colitis

PhD student Grzegorz Jerzy Maciag, Jensen Lab, Novo Nordisk Foundation Center for Stem Cell Biology

09:30 – 09:45

Coffee, croissants and discussion

09:45 – 10:30

Molecular Consequences of Influenza A infections On Hypothalamic Cell Populations

Postdoc René Lemcke, Kornum Lab, Department of Neuroscience, University of Copenhagen

Location: Room 16.6.16 in the Faculty Club and zoom

28.09.22

09:00 – 09:30

Single-cell Profiling of the Human Lateral Hypothalamic Area

Postdoc Cecilia Engel Thomas, Pers Lab, Novo Nordisk Foundation Center for Basic Metabolic Research

09:30 – 09:45

Coffee, croissants and discussion

09:45 – 10:30

Evercode: Single Cell at Unprecedented Scale

Sales Manager Mike Day, Parse Biosciences

Location: Maersk Tower top floor, 7.15.92 and zoom

30.05.22  

09:15 – 10:00

Brain Glucose Sensing

Postdoc Jenny Brown, Novo Nordisk Foundation Center for Basic Metabolic Research, Pers lab

10:00 – 10:15

Coffee and croissants

10:15 – 11:00

Neurodegeneration of the lentiform nucleus in parkinsonian diseases at the single cell level

Postdoc Rasmus Rydbirk, Biotech Research & Innovation Centre, Khodosevich lab

29.04.22

15:00-16:00: Francisco Quintana, Brigham and Women's Hospital

Role of astrocytes in the control of CNS inflammation

location: zoom

24.03.22  

15:00-16:00: Jeffrey Moffitt, Harvard Medical School

Tissue atlases with MERFISH

location: zoom

25.02.22  

09:00-10:00

Jun Hee Lee, University of Michigan Medical School

See Everything Quickly through SEQ-Scope -- Microscopic Examination of Spatial Transcriptome

location: zoom

28.01.22  

09:00-09:40

Joanna Kalucka, Department of Biomedicine, AU

Angiogenesis revisited: role of endothelial heterogeneity in health and disease

10:00-10:40

Jeroen Aerts,  Resolve Biosciences

Every cell matters: subcellular spatial and contextual transcriptomics

location: zoom

01.12.21

09:00 – 09:40

Differentiating human adipocytes share trajectories across brown and white depots

Nagendra Prasad Palani, Scheele Lab, Novo Nordisk Foundation Center for Basic Metabolic Research

10:00 – 10:40

Vesalius: high-resolution in silico anatomization of Spatial Transcriptomic data using Image Analysis

Patrick Martin, Won Lab, Biotech Research & Innovation Centre

29.10.21   

09:00-10:00: Peter Kharchenko, Harvard Medical School. Analysis of multi-cellular expression programs from inter-individual variation

location: meeting room 7.15.92 at Maersk Building 15th floor and zoom

27.08.21   

09:00-09:40: Viktor Petukhov, BRIC, KU. Cacoa – new tool for comparison of single-cell data between health and disease

10:00-10:40: Nicola Meola, Bio-Techne. RNAscopeTM HiPlex v2: Enhancing Spatial Mapping In Your Research...and more stories

location: Faculty Lounge 7.15.107B at Maersk Building 15th floor and zoom

28.05.21   

15:00-16:00: Seth Blackshaw, Johns Hopkins University. Building and Rebuilding the Hypothalamus.

location: zoom

30.04.21   

09:00-10:00: Itai Yanai, New York University Grossman School of Medicine. Exploring tumorigenesis and host-pathogen interactions using single-cell and spatial transcriptomics.

26.03.21   

09:00-10:00: John Wahlgren, 10X Genomics. 10X Genomics product update and roadmap 2021-2022

location: Zoom

location: zoom

26.02.21   

09:00-10:00: Igor Adameyko, Karolinska Institutet/Medical University of Vienna. Evolutionary conserved and non-conserved mechanisms of a cell fate choice

location: zoom 

29.01.21

09:00-10:00: Rong Fan, Yale University. NGS-based Spatial Omics Profiling at Cellular Level.

location: zoom

27.11.20 

09:00-10:00: Holger Heyn, CRG Barcelona, Spain. Towards a high-quality human cell atlas: Applications and Guidelines

location: zoom                                                                           

30.10.20

09:00-10:00: Roman Romanov, Medical University of Vienna, Austria. Designlogic of molecular and spatial cellular attributes during hypothalamus development.

location: Zoom