Events
09.02.24
February
Maersk Tower top floor, 7.15.92
9:00-9:45: Zehra Caldwell Abay-Nørgaard, Kirkeby lab, reNEW, UCPH, Unravelling the development of the arcuate nucleus using stem cells
9:45-10:30: Laura Wolbeck, Khodosevich lab, BRIC, UCPH, Differential impact of maternal inflammation on neuronal progenitors in the developing neocortex
15.03.24
March
Maersk Tower top floor, 7.15.92
9:00-9:45: Ali Altintas, Barres lab, CBMR, KU, Effect of let-7 microinjection in mouse blastomeres: an RNA-seq analysis of ‘single’ cells
9:45-10:30: Jacob Hecksher, Gubra, TBA
12.04.24
April
Maersk Tower top floor, 7.15.92
13:00-13:45: Xiangning Ding, Paludan lab, AU, Deciphering single-cell transcriptome reveals key regulator in immune response against HSV-1 infection in mouse brainstem
13:45-14:30: Asta Mannstaedt Rasmussen, Pedersed lab, AU, Probabilistic modeling of microRNA activity at the single cell level
17.05.24
May
Maersk Tower top floor, 7.15.92
9:00-9:45: Mustafa Ghanizada, Kløverpris lab, ISIM, KU, Single-cell RNA sequencing of liver and draining lymph nodes from HIV infected individuals
9:45-10:30: Jamie Yam Auxillos, Sandelin lab, BRIC, KU, A microfluidics platform for spatially resolved analysis of the impact of microenvironmental gradients on cancer cell phenotypes
14.06.24
June
Maersk Tower top floor, 7.15.92
9:00-9:45: TBA
9:45-10:30: TBA
Single Cell Seminars have been held since 2016, here only Seminars since Oct 2020 are shown
12.01.24
9:00-9:45: Wenning Zheng, ISIM, UCPH, CITE-seq and T cell receptor sequencing reveal potential local precursor of skin-resident CD8 T cells in health and disease
Maersk Tower top floor, 7.15.92
15.12.23
9:00-9:45: Carmelo Bellardita, Department of Neuroscience, UCPH, Microphagens reside in the muscle spindle to control sensorimotor function at millisecond timescale
9:45-10:30: Xian Xin, Khodosevich lab, BRIC, UCPH, Unraveling Epileptogenesis Mechanisms via scRNA-seq from Scn2ap.A263V Mouse Model
Maersk Tower top floor, 7.15.92
17.11.23
9:00-9:45: Gaurav Rathore, Kirkeby lab, reNEW, UCPH, Studying Early Human Neural regionalisation in a Microfluidic Model with Single-Cell Transcriptomics
9:45-10:30: Migle Mikutenaite, Weischenfeldt lab, BRIC, UCPH, Tumour-microenvironment interactions in prostate cancer disease trajectories
Maersk Tower top floor, 7.15.92
13.10.23
9:00-9:45: Dorottya Ralbovszki, Vanessa Hall lab, Department of Veterinary and Animal Sciences, UCPH, Single cell mapping the evolution of the spatial processing centre in the brain
9:45-10:30: Albin Sandelin, BRIC, UCPH, A microfluidics workflow for spatial analysis of microenvironmental gradient impact on cancer cell phenotypes
Maersk Tower top floor, 7.15.92
24.02.23
PhD student Frederik Nørby Friis Sørensen: Network analysis of epileptic TSC2 pediatric patients
Postdoc Mette Q. Ludwig: Transcriptional states underlying cagrilintide signaling in the dorsal vagal complex
Faculty Club at Panum (Mødelokale 16.6.16) and on Zoom
27.01.23
Postdoc Bernd Coester: Intersecting Neuroscience and snRNA sequencing to add projection identities to neuronal data sets
Assistant Professor Navneet: A Vasistha:Single-cell analysis of myelin-neuron interactions in 22q11.2 model of psychiatric illness
Faculty Club at Panum (Mødelokale 16.6.16) and on Zoom
16.12.22
PhD student Katarina Dragicevic: Hiding in plain sight: uncovering diseased interneuron subtypes in a 15q.13.3+/- schizophrenia mouse model
PhD student Petar Todorov: How to use your single-cell data to select spatial probes
Faculty Club at Panum (Mødelokale 16.6.16) and on Zoom
25.11.22
09:00 – 09:30
Clonal evolution of glioblastoma during therapy at single cell resolution
postdoc Josephine Deleuran Hendriksen, Weichenfeldt Lab, Biotech Research and Innovation Centre, University of Copenhagen
09:30 – 09:45
Coffee, croissants and discussion
09:45 – 10:30
Using multimodal single cell sequencing of the human liver to dissect the genetic basis of diabetes and obesity
Postdoc Malte Thodberg, Hansen Lab, Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen
Location: Meeting room 16.6.16 in the Faculty Club and zoom
28.10.22
09:00 – 09:30
STAT signalling promotes the emergence of regenerative cell states in ulcerative colitis
PhD student Grzegorz Jerzy Maciag, Jensen Lab, Novo Nordisk Foundation Center for Stem Cell Biology
09:30 – 09:45
Coffee, croissants and discussion
09:45 – 10:30
Molecular Consequences of Influenza A infections On Hypothalamic Cell Populations
Postdoc René Lemcke, Kornum Lab, Department of Neuroscience, University of Copenhagen
Location: Room 16.6.16 in the Faculty Club and zoom
28.09.22
09:00 – 09:30
Single-cell Profiling of the Human Lateral Hypothalamic Area
Postdoc Cecilia Engel Thomas, Pers Lab, Novo Nordisk Foundation Center for Basic Metabolic Research
09:30 – 09:45
Coffee, croissants and discussion
09:45 – 10:30
Evercode: Single Cell at Unprecedented Scale
Sales Manager Mike Day, Parse Biosciences
Location: Maersk Tower top floor, 7.15.92 and zoom
30.05.22
09:15 – 10:00
Brain Glucose Sensing
Postdoc Jenny Brown, Novo Nordisk Foundation Center for Basic Metabolic Research, Pers lab
10:00 – 10:15
Coffee and croissants
10:15 – 11:00
Neurodegeneration of the lentiform nucleus in parkinsonian diseases at the single cell level
Postdoc Rasmus Rydbirk, Biotech Research & Innovation Centre, Khodosevich lab
29.04.22
15:00-16:00: Francisco Quintana, Brigham and Women's Hospital
Role of astrocytes in the control of CNS inflammation
location: zoom
24.03.22
15:00-16:00: Jeffrey Moffitt, Harvard Medical School
Tissue atlases with MERFISH
location: zoom
25.02.22
09:00-10:00
Jun Hee Lee, University of Michigan Medical School
See Everything Quickly through SEQ-Scope -- Microscopic Examination of Spatial Transcriptome
location: zoom
28.01.22
09:00-09:40
Joanna Kalucka, Department of Biomedicine, AU
Angiogenesis revisited: role of endothelial heterogeneity in health and disease
10:00-10:40
Jeroen Aerts, Resolve Biosciences
Every cell matters: subcellular spatial and contextual transcriptomics
location: zoom
01.12.21
09:00 – 09:40
Differentiating human adipocytes share trajectories across brown and white depots
Nagendra Prasad Palani, Scheele Lab, Novo Nordisk Foundation Center for Basic Metabolic Research
10:00 – 10:40
Vesalius: high-resolution in silico anatomization of Spatial Transcriptomic data using Image Analysis
Patrick Martin, Won Lab, Biotech Research & Innovation Centre
29.10.21
09:00-10:00: Peter Kharchenko, Harvard Medical School. Analysis of multi-cellular expression programs from inter-individual variation
location: meeting room 7.15.92 at Maersk Building 15th floor and zoom
27.08.21
09:00-09:40: Viktor Petukhov, BRIC, KU. Cacoa – new tool for comparison of single-cell data between health and disease
10:00-10:40: Nicola Meola, Bio-Techne. RNAscopeTM HiPlex v2: Enhancing Spatial Mapping In Your Research...and more stories
location: Faculty Lounge 7.15.107B at Maersk Building 15th floor and zoom
28.05.21
15:00-16:00: Seth Blackshaw, Johns Hopkins University. Building and Rebuilding the Hypothalamus.
location: zoom
30.04.21
09:00-10:00: Itai Yanai, New York University Grossman School of Medicine. Exploring tumorigenesis and host-pathogen interactions using single-cell and spatial transcriptomics.
26.03.21
09:00-10:00: John Wahlgren, 10X Genomics. 10X Genomics product update and roadmap 2021-2022
location: Zoom
location: zoom
26.02.21
09:00-10:00: Igor Adameyko, Karolinska Institutet/Medical University of Vienna. Evolutionary conserved and non-conserved mechanisms of a cell fate choice
location: zoom
29.01.21
09:00-10:00: Rong Fan, Yale University. NGS-based Spatial Omics Profiling at Cellular Level.
location: zoom
27.11.20
09:00-10:00: Holger Heyn, CRG Barcelona, Spain. Towards a high-quality human cell atlas: Applications and Guidelines
location: zoom
30.10.20
09:00-10:00: Roman Romanov, Medical University of Vienna, Austria. Designlogic of molecular and spatial cellular attributes during hypothalamus development.
location: Zoom