Partners

Lab & Techniques

William Agace, Experimental & Translational Immunology, Danish Technical University.
Dropseq.
Mucosal Immunology

Kim Jensen, Novo Nordisk Foundation Center for Stem Cell Medicine, reNEW, University of Copenhagen.
Jensen group web page
10X Genomics single cell RNA-seq, Computation.

Lars Juhl Jensen, Novo Nordisk Foundation Center for Protein Research, University of Copenhagen
Juhl Jensen web page
Computation

Joanna Kalucka, Department of Biomedicine, Aarhus University
Kalucka web page
10X Genomics single cell RNA-seq, computation

Konstantin Khodosevich, Biotech Research and Innovation Centre, University of Copenhagen.
Khodosevich group web page
Smart-seq2, 10X Genomics single cell and nucleus RNA-seq, 10X Visium, Computation.

Birgitte R. Kornum, Department of Neuroscience, University of Copenhagen
MSL web page
10X Genomics single cell and nucleus RNA-seq, computation.

Karsten Kristiansen, Genomics and molecular Biomedicine, Dept. of Biology, University of Copenhagen
Kristiansen web page
Single-cell and single-nucleus RNA-seq using iDrops and Drop-seq

Agnete Kirkeby, Novo Nordisk Foundation Center for Stem Cell Medicine, reNEW, University of Copenhagen.
Kirkeby group web page
Stem cell modeling and computation.

Susanne Mandrup, Functional Genomics & Metabolism Research Unit, Department of Biochemistry and Molecular Biology, University of Southern Denmark
Mandrup group Web page
10X Genomics single cell and nucleus RNA-seq /ATAC-seq, computation

Kedar Natarajan, Department of Biochemistry and Molecular Biology, University of Southern Denmark.
Natarajan group web page
Smart-seq2, 10X Genomics single cell RNA-seq, Computation.

Lars Rønn Olsen, Single Cell Omics group, Section for Bioinformatics, DTU Health Technology, Technical University of Denmark
Olsen web page
Computation

Tune H Pers, Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen.
Pers group web page
10X Genomics single-cell and nucleus RNA-seq, single-nucleus ATAC-seq, 10X Visium, computation, integration with genome-wide association data.

Kristoffer Vitting-Seerup, Bioinformatics Section, DTU
Isoform Analysis Group web page
Computation with a specialty in full-length data types (SMART-seq2/3 etc)

Flow Cytometry and Single Cell Core Facility, Department of Immunology and Microbiology, Faculty of Health and Medical Sciences, University of Copenhagen
FCSC web page
10X Genomics single cell and nuclei RNAseq, BD Rhapsody scRNAseq, Smart-seq2, 10X Cellranger primary analysis.