Partners

 

  • William Agace, Experimental & Translational Immunology, Danish Technical University.
    Dropseq.
    Mucosal Immunology

  • Vanessa Hall, Group of Brain Development and Disease, Department of Veterinary and Animal Sciences, University of Copenhagen
    Hall group web page
    10X Genomics single cell RNA-seq

  • Kim Jensen, Novo Nordisk Foundation Center for Stem Cell Medicine, reNEW, University of Copenhagen.
    Jensen group web page
    10X Genomics single cell RNA-seq, Computation.

  • Lars Juhl Jensen, Novo Nordisk Foundation Center for Protein Research, University of Copenhagen
    Juhl Jensen web page
    Computation

  • Joanna Kalucka, Department of Biomedicine, Aarhus University
    Kalucka web page
    10X Genomics single cell RNA-seq, computation

  • Konstantin Khodosevich, Biotech Research and Innovation Centre, University of Copenhagen.
    Khodosevich group web page
    Smart-seq2, 10X Genomics single cell and nucleus RNA-seq, 10X Visium, Computation.

  • Birgitte R. Kornum, Department of Neuroscience, University of Copenhagen
    MSL web page
    10X Genomics single cell and nucleus RNA-seq, computation.

  • Karsten Kristiansen, Genomics and molecular Biomedicine, Dept. of Biology, University of Copenhagen
    Kristiansen web page
    Single-cell and single-nucleus RNA-seq using iDrops and Drop-seq

  • Agnete Kirkeby, Novo Nordisk Foundation Center for Stem Cell Medicine, reNEW, University of Copenhagen.
    Kirkeby group web page
    Stem cell modeling and computation.

  • Susanne Mandrup, Functional Genomics & Metabolism Research Unit, Department of Biochemistry and Molecular Biology, University of Southern Denmark
    Mandrup group Web page
    10X Genomics single cell and nucleus RNA-seq /ATAC-seq, computation

  • Kedar Natarajan, Department of Biochemistry and Molecular Biology, University of Southern Denmark.
    Natarajan group web page
    Smart-seq2, 10X Genomics single cell RNA-seq, Computation.

  • Lars Rønn Olsen, Single Cell Omics group, Section for Bioinformatics, DTU Health Technology, Technical University of Denmark
    Olsen web page
    Computation

  • Tune H Pers, Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen.
    Pers group web page
    10X Genomics single-cell and nucleus RNA-seq, single-nucleus ATAC-seq, 10X Visium, computation, integration with genome-wide association data.

  • Kristoffer Vitting-Seerup, Bioinformatics Section, DTU
    Computation with a specialty in full-length data types (SMART-seq2/3 etc)

  • Kyoung Jae Won,
    Computation.

  • Flow Cytometry and Single Cell Core Facility, Department of Immunology and Microbiology, Faculty of Health and Medical Sciences, University of Copenhagen
    FCSC web page
    10X Genomics single cell and nuclei RNAseq, BD Rhapsody scRNAseq, Smart-seq2, 10X Cellranger primary analysis

  • Ilary Allodi, Integrative Neuroscience Unit, Department of Neuroscience, University of Copenhagen
    Department of Neuroscience web page
    Smart-seq2, Multiplexing HiplexUP (ACDbio) and Xenium In situ analysis (10xGenomics), GeoMX Nanostring, computation